Modification of Support Vector Machine for Microarray Data Analysis

1
dr._sk_sarif_hassan
dr._sk_sarif_hassan
2
Vrushali Dipak Fangal
Vrushali Dipak Fangal
3
Dr. Sk. Sarif Hassan
Dr. Sk. Sarif Hassan
1 Indian Statistical Institute, Kolkata, India

Send Message

To: Author

GJCST Volume 13 Issue A1

Article Fingerprint

ReserarchID

L6N5K

Modification of Support Vector Machine for Microarray Data Analysis Banner
  • English
  • Afrikaans
  • Albanian
  • Amharic
  • Arabic
  • Armenian
  • Azerbaijani
  • Basque
  • Belarusian
  • Bengali
  • Bosnian
  • Bulgarian
  • Catalan
  • Cebuano
  • Chichewa
  • Chinese (Simplified)
  • Chinese (Traditional)
  • Corsican
  • Croatian
  • Czech
  • Danish
  • Dutch
  • Esperanto
  • Estonian
  • Filipino
  • Finnish
  • French
  • Frisian
  • Galician
  • Georgian
  • German
  • Greek
  • Gujarati
  • Haitian Creole
  • Hausa
  • Hawaiian
  • Hebrew
  • Hindi
  • Hmong
  • Hungarian
  • Icelandic
  • Igbo
  • Indonesian
  • Irish
  • Italian
  • Japanese
  • Javanese
  • Kannada
  • Kazakh
  • Khmer
  • Korean
  • Kurdish (Kurmanji)
  • Kyrgyz
  • Lao
  • Latin
  • Latvian
  • Lithuanian
  • Luxembourgish
  • Macedonian
  • Malagasy
  • Malay
  • Malayalam
  • Maltese
  • Maori
  • Marathi
  • Mongolian
  • Myanmar (Burmese)
  • Nepali
  • Norwegian
  • Pashto
  • Persian
  • Polish
  • Portuguese
  • Punjabi
  • Romanian
  • Russian
  • Samoan
  • Scots Gaelic
  • Serbian
  • Sesotho
  • Shona
  • Sindhi
  • Sinhala
  • Slovak
  • Slovenian
  • Somali
  • Spanish
  • Sundanese
  • Swahili
  • Swedish
  • Tajik
  • Tamil
  • Telugu
  • Thai
  • Turkish
  • Ukrainian
  • Urdu
  • Uzbek
  • Vietnamese
  • Welsh
  • Xhosa
  • Yiddish
  • Yoruba
  • Zulu

The role of protuberant data analysis in selection of certain genes having distinctive level of activities between conditions of interest i.e diseased gene and normal genes is very significant. Nowa-days it is become a standard in gene analysis that microarray of DNA is a crucial data preparation step in systemization and other biological analysis. We consider the problem of constructing an accurate prediction rule for separating the different labels of genes in microarray gene expression data. Use of SVM in such data analysis is not new but it is not up to the mark we desire. So in this manuscript, we have tried to modify Support Vector Machine (SVM) for better accuracy in cancer genes systemization. Here we have modified SVM to account for gene redundancy and keep a check on it. In the other approach, instead of keeping bias a constant in SVM, we have tried to modify SVM by bias variation which we call as Orthogonal Vertical Permutator (OVP).

10 Cites in Articles

References

  1. G Eason,B Noble,Ian Sneddon (1955). On certain integrals of Lipschitz-Hankel type involving products of bessel functions.
  2. J Maxwell (1892). A Treatise on Electricity and Magnetism.
  3. I Jacobs,C Bean (1963). Fine Particles, Thin Films and Exchange Anisotropy (Effects of Finite Dimensions and Interfaces on the Basic Properties of Ferromagnets).
  4. Koby Crammer,Yoram Singer (2001). On the Learnability and Design of Output Codes for Multiclass Problems.
  5. R Nicole Unknown Title.
  6. Harris Drucker,Burges,J Christopher,Linda Kaufman,Alexander Smola,Vladimir Vapnik (1997). Support Vector Regression Machines.
  7. Michael Ferris,Todd Munson (2002). Interior-Point Methods for Massive Support Vector Machines.
  8. Terrence Furey,Nello Cristianini,Nigel Duffy,David Bednarski,Michèl Schummer,David Haussler (2000). Support vector machine classification and validation of cancer tissue samples using microarray expression data.
  9. T Yorozu,M Hirano,K Oka,Y Tagawa (1982). Electron Spectroscopy Studies on Magneto-Optical Media and Plastic Substrate Interface.
  10. M Young (1989). The Technical Writer's Handbook.

Funding

No external funding was declared for this work.

Conflict of Interest

The authors declare no conflict of interest.

Ethical Approval

No ethics committee approval was required for this article type.

Data Availability

Not applicable for this article.

dr._sk_sarif_hassan. 2013. \u201cModification of Support Vector Machine for Microarray Data Analysis\u201d. Global Journal of Computer Science and Technology - A: Hardware & Computation GJCST-A Volume 13 (GJCST Volume 13 Issue A1): .

Download Citation

[wasabi_article_md]
Issue Cover
GJCST Volume 13 Issue A1
Pg. 11- 15
Journal Specifications

Crossref Journal DOI 10.17406/gjcst

Print ISSN 0975-4350

e-ISSN 0975-4172

Classification
Not Found
Version of record

v1.2

Issue date

August 1, 2013

Language

English

Experiance in AR

The methods for personal identification and authentication are no exception.

Read in 3D

The methods for personal identification and authentication are no exception.

Article Matrices
Total Views: 9545
Total Downloads: 2557
2026 Trends
Research Identity (RIN)
Related Research

Published Article

The role of protuberant data analysis in selection of certain genes having distinctive level of activities between conditions of interest i.e diseased gene and normal genes is very significant. Nowa-days it is become a standard in gene analysis that microarray of DNA is a crucial data preparation step in systemization and other biological analysis. We consider the problem of constructing an accurate prediction rule for separating the different labels of genes in microarray gene expression data. Use of SVM in such data analysis is not new but it is not up to the mark we desire. So in this manuscript, we have tried to modify Support Vector Machine (SVM) for better accuracy in cancer genes systemization. Here we have modified SVM to account for gene redundancy and keep a check on it. In the other approach, instead of keeping bias a constant in SVM, we have tried to modify SVM by bias variation which we call as Orthogonal Vertical Permutator (OVP).

Our website is actively being updated, and changes may occur frequently. Please clear your browser cache if needed. For feedback or error reporting, please email [email protected]
×

This Page is Under Development

We are currently updating this article page for a better experience.

Request Access

Please fill out the form below to request access to this research paper. Your request will be reviewed by the editorial or author team.
X

Quote and Order Details

Contact Person

Invoice Address

Notes or Comments

This is the heading

Lorem ipsum dolor sit amet, consectetur adipiscing elit. Ut elit tellus, luctus nec ullamcorper mattis, pulvinar dapibus leo.

High-quality academic research articles on global topics and journals.

Modification of Support Vector Machine for Microarray Data Analysis

Vrushali Dipak Fangal
Vrushali Dipak Fangal
Dr. Sk. Sarif Hassan
Dr. Sk. Sarif Hassan

Research Journals