A Novel Approach to Genome Editing Using Cellular Automata Evolutions of Adjoints Sequences

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ethirajan_govindarajan
ethirajan_govindarajan
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Prashanthi Govindarajan
Prashanthi Govindarajan
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Sathya Govindarajan
Sathya Govindarajan
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Ethirajan Govindarajan
Ethirajan Govindarajan

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A Novel Approach to Genome Editing Using Cellular Automata Evolutions of Adjoints Sequences

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Abstract

This paper proposes a novel method for genome editing using cellular automata evolutions of adjoints of Adenine, Thymine, Guanine, and Cytosine. The adjoints of the given a genome sequence are the characteristic binary string sequences. For example, the adjoint of Adenine of a given genome sequence is a binary string consisting of 0’s and 1’s where 1’s corresponds to the presence of Adenine in the genome sequence. So, one can have four adjoint sequences of Adenine, Thymine, Guanine, and Cytosine corresponding to a given genome sequence. One-dimensional three neighborhood binary value cellular automata rules can be applied to an adjoint sequence and the desired number of evolutions could be obtained. This rule is defined by a linear Boolean function and one can have 256 such linear Boolean functions. Genome editing is carried out by superimposing the evolved adjoint sequence on the original genome sequence or on its successive evolutions. In this manner, one can have four ways of genome editing using four adjoint sequences and evolutions.

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Funding

No external funding was declared for this work.

Conflict of Interest

The authors declare no conflict of interest.

Ethical Approval

No ethics committee approval was required for this article type.

Data Availability

Not applicable for this article.

How to Cite This Article

ethirajan_govindarajan. 2020. \u201cA Novel Approach to Genome Editing Using Cellular Automata Evolutions of Adjoints Sequences\u201d. Global Journal of Computer Science and Technology - G: Interdisciplinary GJCST-G Volume 20 (GJCST Volume 20 Issue G1): .

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GJCST Volume 20 Issue G1
Pg. 23- 32
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Crossref Journal DOI 10.17406/gjcst

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e-ISSN 0975-4172

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March 2, 2020

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This paper proposes a novel method for genome editing using cellular automata evolutions of adjoints of Adenine, Thymine, Guanine, and Cytosine. The adjoints of the given a genome sequence are the characteristic binary string sequences. For example, the adjoint of Adenine of a given genome sequence is a binary string consisting of 0’s and 1’s where 1’s corresponds to the presence of Adenine in the genome sequence. So, one can have four adjoint sequences of Adenine, Thymine, Guanine, and Cytosine corresponding to a given genome sequence. One-dimensional three neighborhood binary value cellular automata rules can be applied to an adjoint sequence and the desired number of evolutions could be obtained. This rule is defined by a linear Boolean function and one can have 256 such linear Boolean functions. Genome editing is carried out by superimposing the evolved adjoint sequence on the original genome sequence or on its successive evolutions. In this manner, one can have four ways of genome editing using four adjoint sequences and evolutions.

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A Novel Approach to Genome Editing Using Cellular Automata Evolutions of Adjoints Sequences

Prashanthi Govindarajan
Prashanthi Govindarajan
Sathya Govindarajan
Sathya Govindarajan
Ethirajan Govindarajan
Ethirajan Govindarajan

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